Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tm6sf1P58749 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tm6sf1P58749 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tm6sf1P58749 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tm6sf1P58749 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tm6sf1P58749 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tm6sf1P58749 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.38■□□□□ 0.37
Tm6sf1P58749 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tm6sf1P58749 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tm6sf1P58749 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tm6sf1P58749 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tm6sf1P58749 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Gm2445-201ENSMUST00000182798 989 ntBASIC17.37■□□□□ 0.37
Tm6sf1P58749 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tm6sf1P58749 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Tm6sf1P58749 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.36■□□□□ 0.37
Tm6sf1P58749 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Mir497b-201ENSMUST00000093601 125 ntBASIC17.36■□□□□ 0.37
Tm6sf1P58749 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Tm6sf1P58749 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tm6sf1P58749 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Gm4875-201ENSMUST00000118257 786 ntBASIC17.35■□□□□ 0.37
Tm6sf1P58749 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Gm10766-202ENSMUST00000194123 606 ntBASIC17.35■□□□□ 0.37
Tm6sf1P58749 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tm6sf1P58749 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tm6sf1P58749 Gm29741-201ENSMUST00000192667 421 ntBASIC17.34■□□□□ 0.37
Tm6sf1P58749 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms