Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.22□□□□□ -0.45
Slc6a1P31648 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Slc6a1P31648 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Slc6a1P31648 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.22□□□□□ -0.45
Slc6a1P31648 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Slc6a1P31648 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.22□□□□□ -0.45
Slc6a1P31648 Gm8344-201ENSMUST00000119813 856 ntBASIC12.22□□□□□ -0.45
Slc6a1P31648 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.22□□□□□ -0.45
Slc6a1P31648 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Slc6a1P31648 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.22□□□□□ -0.45
Slc6a1P31648 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.22□□□□□ -0.45
Slc6a1P31648 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.22□□□□□ -0.45
Slc6a1P31648 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a1P31648 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a1P31648 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a1P31648 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.21□□□□□ -0.45
Slc6a1P31648 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a1P31648 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a1P31648 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a1P31648 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a1P31648 Gm7222-201ENSMUST00000117512 906 ntBASIC12.21□□□□□ -0.45
Slc6a1P31648 Gm8097-201ENSMUST00000117903 829 ntBASIC12.21□□□□□ -0.45
Slc6a1P31648 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.21□□□□□ -0.45
Slc6a1P31648 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.21□□□□□ -0.45
Slc6a1P31648 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.21□□□□□ -0.45
Slc6a1P31648 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a1P31648 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.21□□□□□ -0.45
Slc6a1P31648 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Slc6a1P31648 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a1P31648 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a1P31648 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a1P31648 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.21□□□□□ -0.45
Slc6a1P31648 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Slc6a1P31648 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a1P31648 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a1P31648 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a1P31648 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a1P31648 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a1P31648 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a1P31648 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a1P31648 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a1P31648 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a1P31648 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.21□□□□□ -0.46
Slc6a1P31648 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a1P31648 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Slc6a1P31648 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a1P31648 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Slc6a1P31648 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms