Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.95□□□□□ -0.18
Hoxa4P06798 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa4P06798 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.94□□□□□ -0.18
Hoxa4P06798 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Syt7-204ENSMUST00000223586 1344 ntBASIC13.94□□□□□ -0.18
Hoxa4P06798 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.94□□□□□ -0.18
Hoxa4P06798 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.94□□□□□ -0.18
Hoxa4P06798 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.94□□□□□ -0.18
Hoxa4P06798 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.94□□□□□ -0.18
Hoxa4P06798 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Hoxa4P06798 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.94□□□□□ -0.18
Hoxa4P06798 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Hoxa4P06798 Gm29667-201ENSMUST00000190817 490 ntBASIC13.94□□□□□ -0.18
Hoxa4P06798 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.94□□□□□ -0.18
Hoxa4P06798 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.94□□□□□ -0.18
Hoxa4P06798 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hoxa4P06798 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa4P06798 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Gm6912-201ENSMUST00000117218 544 ntBASIC13.93□□□□□ -0.18
Hoxa4P06798 Gm15321-201ENSMUST00000121290 288 ntBASIC13.93□□□□□ -0.18
Hoxa4P06798 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Gm21854-201ENSMUST00000179901 471 ntBASIC13.93□□□□□ -0.18
Hoxa4P06798 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.93□□□□□ -0.18
Hoxa4P06798 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.93□□□□□ -0.18
Hoxa4P06798 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.93□□□□□ -0.18
Hoxa4P06798 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa4P06798 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hoxa4P06798 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.92□□□□□ -0.18
Hoxa4P06798 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms