Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P03980 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P03980 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P03980 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P03980 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P03980 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P03980 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
P03980 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P03980 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
P03980 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.97□□□□□ -0.65
P03980 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
P03980 Gm7153-201ENSMUST00000117092 455 ntBASIC10.97□□□□□ -0.65
P03980 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.97□□□□□ -0.65
P03980 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Gm28033-201ENSMUST00000184224 96 ntBASIC10.97□□□□□ -0.65
P03980 Gm2272-201ENSMUST00000194903 582 ntBASIC10.97□□□□□ -0.65
P03980 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC10.97□□□□□ -0.65
P03980 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC10.97□□□□□ -0.65
P03980 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
P03980 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
P03980 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
P03980 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
P03980 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.97□□□□□ -0.65
P03980 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.97□□□□□ -0.65
P03980 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P03980 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
P03980 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
P03980 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.96□□□□□ -0.65
P03980 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.96□□□□□ -0.65
P03980 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC10.96□□□□□ -0.65
P03980 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
P03980 Ank2-226ENSMUST00000189368 339 ntBASIC10.96□□□□□ -0.65
P03980 Gm45098-201ENSMUST00000207179 657 ntBASIC10.96□□□□□ -0.65
P03980 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.96□□□□□ -0.65
P03980 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P03980 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.96□□□□□ -0.65
P03980 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
P03980 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
P03980 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
P03980 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
P03980 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
P03980 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
P03980 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P03980 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P03980 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
P03980 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
P03980 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
P03980 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
P03980 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
P03980 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
P03980 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P03980 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P03980 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P03980 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P03980 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P03980 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P03980 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
P03980 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P03980 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms