Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Setdb1O88974 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Setdb1O88974 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Setdb1O88974 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.27■□□□□ 0.35
Setdb1O88974 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Setdb1O88974 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Setdb1O88974 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Setdb1O88974 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Setdb1O88974 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Setdb1O88974 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Setdb1O88974 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Setdb1O88974 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Setdb1O88974 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Setdb1O88974 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Setdb1O88974 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Setdb1O88974 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.26■□□□□ 0.35
Setdb1O88974 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.26■□□□□ 0.35
Setdb1O88974 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Setdb1O88974 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
Setdb1O88974 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.26■□□□□ 0.35
Setdb1O88974 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.26■□□□□ 0.35
Setdb1O88974 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Setdb1O88974 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Setdb1O88974 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Setdb1O88974 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.26■□□□□ 0.35
Setdb1O88974 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Setdb1O88974 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.26■□□□□ 0.35
Setdb1O88974 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Setdb1O88974 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Setdb1O88974 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Gm15957-201ENSMUST00000118893 974 ntBASIC17.25■□□□□ 0.35
Setdb1O88974 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.25■□□□□ 0.35
Setdb1O88974 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.25■□□□□ 0.35
Setdb1O88974 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Setdb1O88974 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Setdb1O88974 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.25■□□□□ 0.35
Setdb1O88974 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.25■□□□□ 0.35
Setdb1O88974 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.25■□□□□ 0.35
Setdb1O88974 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Setdb1O88974 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Setdb1O88974 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Setdb1O88974 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.24■□□□□ 0.35
Setdb1O88974 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Setdb1O88974 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.24■□□□□ 0.35
Setdb1O88974 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.24■□□□□ 0.35
Setdb1O88974 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.24■□□□□ 0.35
Setdb1O88974 Gm7561-201ENSMUST00000211203 886 ntBASIC17.24■□□□□ 0.35
Setdb1O88974 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Setdb1O88974 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Setdb1O88974 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.24■□□□□ 0.35
Setdb1O88974 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Setdb1O88974 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Setdb1O88974 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Setdb1O88974 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Setdb1O88974 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Setdb1O88974 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Setdb1O88974 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.23■□□□□ 0.35
Setdb1O88974 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.23■□□□□ 0.35
Setdb1O88974 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.23■□□□□ 0.35
Setdb1O88974 Gm8463-201ENSMUST00000208573 613 ntBASIC17.23■□□□□ 0.35
Setdb1O88974 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Setdb1O88974 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms