Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Gm15427-201ENSMUST00000117288 531 ntBASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Gm18733-201ENSMUST00000173950 856 ntBASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Slc22a28B2RT89 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Slc22a28B2RT89 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Slc22a28B2RT89 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Slc22a28B2RT89 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc22a28B2RT89 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc22a28B2RT89 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Slc22a28B2RT89 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.06□□□□□ -0.32
Slc22a28B2RT89 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc22a28B2RT89 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc22a28B2RT89 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.06□□□□□ -0.32
Slc22a28B2RT89 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc22a28B2RT89 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms