Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Gm5364-201ENSMUST00000216789 889 ntBASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc112A0AUP1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc112A0AUP1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc112A0AUP1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc112A0AUP1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc112A0AUP1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc112A0AUP1 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.18■□□□□ 0.18
Ccdc112A0AUP1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc112A0AUP1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc112A0AUP1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ccdc112A0AUP1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc112A0AUP1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc112A0AUP1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc112A0AUP1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc112A0AUP1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc112A0AUP1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms