Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 AV026068-213ENSMUST00000223675 1171 ntBASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm13294-201ENSMUST00000121757 1330 ntBASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ssr1-204ENSMUST00000225319 1610 ntBASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm43570-201ENSMUST00000199951 3688 ntBASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm30238-201ENSMUST00000195528 2603 ntBASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm4691-201ENSMUST00000182339 1000 ntBASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm2451-201ENSMUST00000199447 999 ntBASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm10290-201ENSMUST00000200451 999 ntBASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm10060-201ENSMUST00000212002 111 ntBASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC9.77□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm42471-201ENSMUST00000201457 1865 ntBASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm13036-201ENSMUST00000117799 748 ntBASIC9.77□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms