Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gm26513-201ENSMUST00000181802 2489 ntBASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gm8096-201ENSMUST00000209921 1591 ntBASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gm11764-201ENSMUST00000120221 623 ntBASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gm7230-201ENSMUST00000173026 815 ntBASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gm28033-201ENSMUST00000184224 96 ntBASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gm42928-201ENSMUST00000197338 3339 ntBASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gm45630-201ENSMUST00000210243 1911 ntBASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gm27459-201ENSMUST00000184860 107 ntBASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gm8597-201ENSMUST00000191525 1109 ntBASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC9.78□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav13-4-dv7A0A075B6C2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms