Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Gm18766-201ENSMUST00000189811 808 ntBASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Gm5779-201ENSMUST00000218467 910 ntBASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Gm12882-201ENSMUST00000121696 517 ntBASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Gm29541-201ENSMUST00000191351 678 ntBASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn3Q9Z0G9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cldn3Q9Z0G9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Gm5566-201ENSMUST00000116118 459 ntBASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Gm27430-201ENSMUST00000184585 107 ntBASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 AA619741-201ENSMUST00000195095 646 ntBASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Gm44333-201ENSMUST00000197168 107 ntBASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn3Q9Z0G9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn3Q9Z0G9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms