Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm19078-201ENSMUST00000206311 727 ntBASIC14.21□□□□□ -0.13
Scn8aQ9WTU3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn8aQ9WTU3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn8aQ9WTU3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn8aQ9WTU3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn8aQ9WTU3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn8aQ9WTU3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn8aQ9WTU3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scn8aQ9WTU3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Gm18018-201ENSMUST00000198273 408 ntBASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Gm15770-201ENSMUST00000117498 584 ntBASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Gm9794-201ENSMUST00000202370 423 ntBASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn8aQ9WTU3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Gm2495-201ENSMUST00000191160 466 ntBASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn8aQ9WTU3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Gm19220-201ENSMUST00000222682 803 ntBASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Gm6180-201ENSMUST00000065243 498 ntBASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms