Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ssu72Q9CY97 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Gm28033-201ENSMUST00000184224 96 ntBASIC14.1□□□□□ -0.15
Ssu72Q9CY97 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Gm44608-201ENSMUST00000206827 855 ntBASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssu72Q9CY97 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Gm2445-201ENSMUST00000182798 989 ntBASIC14.09□□□□□ -0.15
Ssu72Q9CY97 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Thap2-203ENSMUST00000218989 527 ntBASIC14.09□□□□□ -0.15
Ssu72Q9CY97 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssu72Q9CY97 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms