Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Gm13474-201ENSMUST00000122466 815 ntBASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Gm25925-201ENSMUST00000158314 306 ntBASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn1Q9CWM4 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Gm10698-201ENSMUST00000182663 604 ntBASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn1Q9CWM4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn1Q9CWM4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Mir1199-201ENSMUST00000117015 119 ntBASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Trmt13-210ENSMUST00000198454 880 ntBASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn1Q9CWM4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms