Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Gm45612-201ENSMUST00000211320 160 ntBASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.69□□□□□ -0.38
Pcdhga3Q91XY5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Gm6973-201ENSMUST00000117080 721 ntBASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Gm15483-201ENSMUST00000120338 456 ntBASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Gm45098-201ENSMUST00000207179 657 ntBASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga3Q91XY5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga3Q91XY5 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms