Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Gm15236-201ENSMUST00000117309 379 ntBASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a6Q8C6K9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Gm15240-201ENSMUST00000118156 720 ntBASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Gm15376-201ENSMUST00000122258 783 ntBASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a6Q8C6K9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Gm27486-201ENSMUST00000184923 80 ntBASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Gm7561-201ENSMUST00000211203 886 ntBASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a6Q8C6K9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms