Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sox17Q61473 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox17Q61473 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.36□□□□□ -0.27
Sox17Q61473 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Sox17Q61473 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sox17Q61473 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Sox17Q61473 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.36□□□□□ -0.27
Sox17Q61473 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sox17Q61473 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox17Q61473 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sox17Q61473 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Gm13836-201ENSMUST00000121159 501 ntBASIC13.35□□□□□ -0.27
Sox17Q61473 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.35□□□□□ -0.27
Sox17Q61473 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.35□□□□□ -0.27
Sox17Q61473 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sox17Q61473 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sox17Q61473 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sox17Q61473 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Sox17Q61473 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox17Q61473 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox17Q61473 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox17Q61473 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox17Q61473 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sox17Q61473 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox17Q61473 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox17Q61473 Gm17807-201ENSMUST00000186869 298 ntBASIC13.34□□□□□ -0.27
Sox17Q61473 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sox17Q61473 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sox17Q61473 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.34□□□□□ -0.27
Sox17Q61473 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.34□□□□□ -0.27
Sox17Q61473 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox17Q61473 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sox17Q61473 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox17Q61473 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox17Q61473 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox17Q61473 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox17Q61473 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms