Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fam196aQ3USH1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Fam196aQ3USH1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.21□□□□□ -0.14
Fam196aQ3USH1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Fam196aQ3USH1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.14
Fam196aQ3USH1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.21□□□□□ -0.14
Fam196aQ3USH1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Gm12176-201ENSMUST00000121420 875 ntBASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Gm1335-201ENSMUST00000121653 386 ntBASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam196aQ3USH1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Gm38223-201ENSMUST00000194484 695 ntBASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Gm18473-201ENSMUST00000220543 868 ntBASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam196aQ3USH1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms