Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Gm14140-201ENSMUST00000119999 995 ntBASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Gm14042-201ENSMUST00000120139 833 ntBASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Gm27525-201ENSMUST00000184465 107 ntBASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.29□□□□□ -0.44
Shisa3Q3UPR0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa3Q3UPR0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa3Q3UPR0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa3Q3UPR0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa3Q3UPR0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Shisa3Q3UPR0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms