Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Gm10275-202ENSMUST00000168697 495 ntBASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Gm3436-201ENSMUST00000179930 840 ntBASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Gm10275-201ENSMUST00000092620 635 ntBASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shcbp1lQ3TTP0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Gm14719-201ENSMUST00000121891 340 ntBASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shcbp1lQ3TTP0 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Gm14042-201ENSMUST00000120139 833 ntBASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Mir125a-201ENSMUST00000083545 68 ntBASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.34□□□□□ -0.11
Shcbp1lQ3TTP0 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms