Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cul4aQ3TCH7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cul4aQ3TCH7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.92□□□□□ -0.02
Cul4aQ3TCH7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cul4aQ3TCH7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.92□□□□□ -0.02
Cul4aQ3TCH7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cul4aQ3TCH7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cul4aQ3TCH7 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Gm15957-201ENSMUST00000118893 974 ntBASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cul4aQ3TCH7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Mzt1-203ENSMUST00000227948 952 ntBASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cul4aQ3TCH7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms