Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Gm7461-201ENSMUST00000058918 827 ntBASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhej1Q3KNJ2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Gm27920-201ENSMUST00000183953 96 ntBASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Gm17968-201ENSMUST00000194902 784 ntBASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhej1Q3KNJ2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms