Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smad1P70340 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.69□□□□□ -0.06
Smad1P70340 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.69□□□□□ -0.06
Smad1P70340 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Smad1P70340 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Smad1P70340 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Smad1P70340 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.68□□□□□ -0.06
Smad1P70340 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.68□□□□□ -0.06
Smad1P70340 Gm27430-201ENSMUST00000184585 107 ntBASIC14.68□□□□□ -0.06
Smad1P70340 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.68□□□□□ -0.06
Smad1P70340 Gm44333-201ENSMUST00000197168 107 ntBASIC14.68□□□□□ -0.06
Smad1P70340 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.68□□□□□ -0.06
Smad1P70340 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Smad1P70340 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smad1P70340 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Smad1P70340 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Smad1P70340 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.68□□□□□ -0.06
Smad1P70340 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smad1P70340 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smad1P70340 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.67□□□□□ -0.06
Smad1P70340 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.67□□□□□ -0.06
Smad1P70340 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smad1P70340 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.67□□□□□ -0.06
Smad1P70340 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.67□□□□□ -0.06
Smad1P70340 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Gm9726-201ENSMUST00000180321 678 ntBASIC14.67□□□□□ -0.06
Smad1P70340 Mir6977-201ENSMUST00000184960 64 ntBASIC14.67□□□□□ -0.06
Smad1P70340 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.67□□□□□ -0.06
Smad1P70340 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.67□□□□□ -0.06
Smad1P70340 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.67□□□□□ -0.06
Smad1P70340 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smad1P70340 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smad1P70340 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smad1P70340 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smad1P70340 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.66□□□□□ -0.06
Smad1P70340 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smad1P70340 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.66□□□□□ -0.06
Smad1P70340 Gm13464-201ENSMUST00000119418 935 ntBASIC14.66□□□□□ -0.06
Smad1P70340 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smad1P70340 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.66□□□□□ -0.06
Smad1P70340 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.66□□□□□ -0.06
Smad1P70340 Rpph1-201ENSMUST00000175096 319 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms