Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.53□□□□□ -0.08
Tubgcp3P58854 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.53□□□□□ -0.08
Tubgcp3P58854 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubgcp3P58854 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubgcp3P58854 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Gm18889-201ENSMUST00000174284 929 ntBASIC14.52□□□□□ -0.09
Tubgcp3P58854 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Tubgcp3P58854 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Tubgcp3P58854 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.52□□□□□ -0.09
Tubgcp3P58854 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Tubgcp3P58854 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.52□□□□□ -0.09
Tubgcp3P58854 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Tubgcp3P58854 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.51□□□□□ -0.09
Tubgcp3P58854 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.51□□□□□ -0.09
Tubgcp3P58854 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.51□□□□□ -0.09
Tubgcp3P58854 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubgcp3P58854 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Tubgcp3P58854 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tubgcp3P58854 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tubgcp3P58854 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubgcp3P58854 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.5□□□□□ -0.09
Tubgcp3P58854 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubgcp3P58854 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.5□□□□□ -0.09
Tubgcp3P58854 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Tubgcp3P58854 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.5□□□□□ -0.09
Tubgcp3P58854 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubgcp3P58854 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.5□□□□□ -0.09
Tubgcp3P58854 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms