Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAB38P57729 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB38P57729 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB38P57729 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB38P57729 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB38P57729 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB38P57729 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB38P57729 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
RAB38P57729 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.14■□□□□ 0.18
RAB38P57729 FRMD8P1-201ENST00000440433 1524 ntBASIC16.14■□□□□ 0.18
RAB38P57729 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB38P57729 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB38P57729 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB38P57729 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB38P57729 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB38P57729 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB38P57729 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB38P57729 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB38P57729 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB38P57729 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB38P57729 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
RAB38P57729 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB38P57729 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB38P57729 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB38P57729 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RAB38P57729 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB38P57729 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB38P57729 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB38P57729 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB38P57729 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAB38P57729 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB38P57729 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB38P57729 IGHV3-22-201ENST00000520721 359 ntBASIC16.13■□□□□ 0.17
RAB38P57729 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB38P57729 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB38P57729 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RAB38P57729 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB38P57729 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB38P57729 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
RAB38P57729 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB38P57729 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB38P57729 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB38P57729 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB38P57729 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB38P57729 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB38P57729 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB38P57729 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB38P57729 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB38P57729 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB38P57729 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB38P57729 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 AP001094.4-201ENST00000579008 2176 ntBASIC16.12■□□□□ 0.17
RAB38P57729 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RAB38P57729 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAB38P57729 AL590627.1-203ENST00000421194 1026 ntBASIC16.12■□□□□ 0.17
RAB38P57729 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.12■□□□□ 0.17
RAB38P57729 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB38P57729 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB38P57729 RNA5SP415-201ENST00000517246 115 ntBASIC16.12■□□□□ 0.17
RAB38P57729 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB38P57729 UNC93B6-202ENST00000528242 690 ntBASIC16.12■□□□□ 0.17
RAB38P57729 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB38P57729 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.12■□□□□ 0.17
RAB38P57729 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB38P57729 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 IL9RP2-201ENST00000423948 1312 ntBASIC16.12■□□□□ 0.17
RAB38P57729 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RAB38P57729 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAB38P57729 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB38P57729 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB38P57729 AC092053.1-201ENST00000605787 1936 ntBASIC16.11■□□□□ 0.17
RAB38P57729 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB38P57729 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RAB38P57729 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms