Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNB1P20700 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.67■□□□□ 0.9
LMNB1P20700 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
LMNB1P20700 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.67■□□□□ 0.9
LMNB1P20700 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.66■□□□□ 0.9
LMNB1P20700 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.66■□□□□ 0.9
LMNB1P20700 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMNB1P20700 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMNB1P20700 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LMNB1P20700 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMNB1P20700 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMNB1P20700 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMNB1P20700 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMNB1P20700 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LMNB1P20700 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMNB1P20700 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMNB1P20700 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.66■□□□□ 0.9
LMNB1P20700 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.66■□□□□ 0.9
LMNB1P20700 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
LMNB1P20700 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.66■□□□□ 0.9
LMNB1P20700 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.66■□□□□ 0.9
LMNB1P20700 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.66■□□□□ 0.9
LMNB1P20700 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.66■□□□□ 0.9
LMNB1P20700 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMNB1P20700 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMNB1P20700 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMNB1P20700 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
LMNB1P20700 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LMNB1P20700 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMNB1P20700 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LMNB1P20700 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
LMNB1P20700 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LMNB1P20700 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LMNB1P20700 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LMNB1P20700 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.65■□□□□ 0.9
LMNB1P20700 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMNB1P20700 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMNB1P20700 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LMNB1P20700 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LMNB1P20700 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
LMNB1P20700 AL512384.1-201ENST00000406683 331 ntBASIC20.65■□□□□ 0.9
LMNB1P20700 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.65■□□□□ 0.9
LMNB1P20700 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LMNB1P20700 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.65■□□□□ 0.9
LMNB1P20700 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
LMNB1P20700 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.65■□□□□ 0.9
LMNB1P20700 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.65■□□□□ 0.9
LMNB1P20700 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMNB1P20700 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
LMNB1P20700 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.65■□□□□ 0.9
LMNB1P20700 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.65■□□□□ 0.9
LMNB1P20700 RARRES2P9-201ENST00000565168 469 ntBASIC20.65■□□□□ 0.9
LMNB1P20700 AC009407.1-201ENST00000568958 598 ntBASIC20.65■□□□□ 0.9
LMNB1P20700 AC008738.7-201ENST00000609744 511 ntBASIC20.65■□□□□ 0.9
LMNB1P20700 AC003101.2-201ENST00000612557 442 ntBASIC20.65■□□□□ 0.9
LMNB1P20700 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.65■□□□□ 0.9
LMNB1P20700 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMNB1P20700 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.65■□□□□ 0.9
LMNB1P20700 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LMNB1P20700 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
LMNB1P20700 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
LMNB1P20700 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LMNB1P20700 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LMNB1P20700 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.64■□□□□ 0.9
LMNB1P20700 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMNB1P20700 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMNB1P20700 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMNB1P20700 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMNB1P20700 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMNB1P20700 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMNB1P20700 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMNB1P20700 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.64■□□□□ 0.89
LMNB1P20700 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.64■□□□□ 0.89
LMNB1P20700 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.64■□□□□ 0.89
LMNB1P20700 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LMNB1P20700 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.64■□□□□ 0.89
LMNB1P20700 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LMNB1P20700 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LMNB1P20700 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMNB1P20700 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LMNB1P20700 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.64■□□□□ 0.89
LMNB1P20700 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.64■□□□□ 0.89
LMNB1P20700 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.64■□□□□ 0.89
LMNB1P20700 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LMNB1P20700 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LMNB1P20700 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMNB1P20700 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.63■□□□□ 0.89
LMNB1P20700 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.63■□□□□ 0.89
LMNB1P20700 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMNB1P20700 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMNB1P20700 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMNB1P20700 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMNB1P20700 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LMNB1P20700 MIR658-201ENST00000385210 100 ntBASIC20.63■□□□□ 0.89
LMNB1P20700 DGCR5-201ENST00000399539 862 ntBASIC20.63■□□□□ 0.89
LMNB1P20700 AP006294.1-201ENST00000415407 339 ntBASIC20.63■□□□□ 0.89
LMNB1P20700 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.63■□□□□ 0.89
LMNB1P20700 RN7SL752P-201ENST00000463779 287 ntBASIC20.63■□□□□ 0.89
LMNB1P20700 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMNB1P20700 AC104794.3-201ENST00000566840 1248 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms