Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CfdP03953 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CfdP03953 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
CfdP03953 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CfdP03953 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CfdP03953 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CfdP03953 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CfdP03953 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.9□□□□□ -0.5
CfdP03953 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CfdP03953 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CfdP03953 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
CfdP03953 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CfdP03953 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CfdP03953 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CfdP03953 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CfdP03953 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.89□□□□□ -0.51
CfdP03953 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
CfdP03953 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CfdP03953 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.89□□□□□ -0.51
CfdP03953 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CfdP03953 Gm13418-201ENSMUST00000119097 944 ntBASIC11.89□□□□□ -0.51
CfdP03953 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.89□□□□□ -0.51
CfdP03953 Gm6089-201ENSMUST00000197666 938 ntBASIC11.89□□□□□ -0.51
CfdP03953 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
CfdP03953 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CfdP03953 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CfdP03953 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.89□□□□□ -0.51
CfdP03953 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
CfdP03953 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.89□□□□□ -0.51
CfdP03953 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CfdP03953 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.88□□□□□ -0.51
CfdP03953 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.88□□□□□ -0.51
CfdP03953 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CfdP03953 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CfdP03953 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.88□□□□□ -0.51
CfdP03953 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CfdP03953 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
CfdP03953 Gm37230-201ENSMUST00000194491 818 ntBASIC11.88□□□□□ -0.51
CfdP03953 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CfdP03953 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.88□□□□□ -0.51
CfdP03953 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.88□□□□□ -0.51
CfdP03953 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.88□□□□□ -0.51
CfdP03953 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.88□□□□□ -0.51
CfdP03953 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.88□□□□□ -0.51
CfdP03953 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.88□□□□□ -0.51
CfdP03953 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.88□□□□□ -0.51
CfdP03953 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.88□□□□□ -0.51
CfdP03953 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CfdP03953 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms