Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
H3f3cP02301 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3cP02301 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
H3f3cP02301 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3cP02301 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3cP02301 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3cP02301 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3cP02301 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3cP02301 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H3f3cP02301 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.23□□□□□ -0.45
H3f3cP02301 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
H3f3cP02301 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.23□□□□□ -0.45
H3f3cP02301 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.23□□□□□ -0.45
H3f3cP02301 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.23□□□□□ -0.45
H3f3cP02301 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
H3f3cP02301 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.23□□□□□ -0.45
H3f3cP02301 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.23□□□□□ -0.45
H3f3cP02301 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.23□□□□□ -0.45
H3f3cP02301 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
H3f3cP02301 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Gm10275-202ENSMUST00000168697 495 ntBASIC12.23□□□□□ -0.45
H3f3cP02301 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.23□□□□□ -0.45
H3f3cP02301 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Gm10275-201ENSMUST00000092620 635 ntBASIC12.23□□□□□ -0.45
H3f3cP02301 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
H3f3cP02301 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
H3f3cP02301 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H3f3cP02301 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
H3f3cP02301 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.22□□□□□ -0.45
H3f3cP02301 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
H3f3cP02301 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.22□□□□□ -0.45
H3f3cP02301 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.22□□□□□ -0.45
H3f3cP02301 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
H3f3cP02301 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Gm13015-201ENSMUST00000118674 204 ntBASIC12.22□□□□□ -0.45
H3f3cP02301 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.22□□□□□ -0.45
H3f3cP02301 Gm23547-201ENSMUST00000158210 271 ntBASIC12.22□□□□□ -0.45
H3f3cP02301 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.22□□□□□ -0.45
H3f3cP02301 Gm10253-201ENSMUST00000194270 940 ntBASIC12.22□□□□□ -0.45
H3f3cP02301 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.22□□□□□ -0.45
H3f3cP02301 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
H3f3cP02301 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.22□□□□□ -0.45
H3f3cP02301 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.22□□□□□ -0.45
H3f3cP02301 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
H3f3cP02301 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3cP02301 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.21□□□□□ -0.45
H3f3cP02301 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
H3f3cP02301 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Mir449b-201ENSMUST00000104833 80 ntBASIC12.21□□□□□ -0.45
H3f3cP02301 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms