Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.21□□□□□ -0.62
Pde6dO55057 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Pde6dO55057 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pde6dO55057 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Pde6dO55057 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Pde6dO55057 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Pde6dO55057 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pde6dO55057 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pde6dO55057 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pde6dO55057 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pde6dO55057 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pde6dO55057 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Pde6dO55057 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.2□□□□□ -0.62
Pde6dO55057 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pde6dO55057 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.2□□□□□ -0.62
Pde6dO55057 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.2□□□□□ -0.62
Pde6dO55057 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pde6dO55057 Gm15165-201ENSMUST00000118140 502 ntBASIC11.2□□□□□ -0.62
Pde6dO55057 Gm13464-201ENSMUST00000119418 935 ntBASIC11.2□□□□□ -0.62
Pde6dO55057 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.2□□□□□ -0.62
Pde6dO55057 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.2□□□□□ -0.62
Pde6dO55057 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pde6dO55057 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.2□□□□□ -0.62
Pde6dO55057 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Pde6dO55057 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pde6dO55057 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pde6dO55057 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Pde6dO55057 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pde6dO55057 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Pde6dO55057 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Pde6dO55057 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pde6dO55057 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Grk6-205ENSMUST00000224653 2976 ntBASIC11.19□□□□□ -0.62
Pde6dO55057 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pde6dO55057 Gm10013-201ENSMUST00000106074 672 ntBASIC11.19□□□□□ -0.62
Pde6dO55057 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.19□□□□□ -0.62
Pde6dO55057 Gm15794-201ENSMUST00000120182 631 ntBASIC11.19□□□□□ -0.62
Pde6dO55057 Gm11950-201ENSMUST00000121615 838 ntBASIC11.19□□□□□ -0.62
Pde6dO55057 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.19□□□□□ -0.62
Pde6dO55057 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.19□□□□□ -0.62
Pde6dO55057 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.19□□□□□ -0.62
Pde6dO55057 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Pde6dO55057 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pde6dO55057 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms