Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cxcl13O55038 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cxcl13O55038 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Cxcl13O55038 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.01□□□□□ -0.49
Cxcl13O55038 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.01□□□□□ -0.49
Cxcl13O55038 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl13O55038 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.01□□□□□ -0.49
Cxcl13O55038 Gm23984-201ENSMUST00000157139 203 ntBASIC12.01□□□□□ -0.49
Cxcl13O55038 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cxcl13O55038 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.01□□□□□ -0.49
Cxcl13O55038 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.01□□□□□ -0.49
Cxcl13O55038 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.01□□□□□ -0.49
Cxcl13O55038 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.01□□□□□ -0.49
Cxcl13O55038 Gm15823-201ENSMUST00000064305 670 ntBASIC12.01□□□□□ -0.49
Cxcl13O55038 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.01□□□□□ -0.49
Cxcl13O55038 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl13O55038 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.01□□□□□ -0.49
Cxcl13O55038 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl13O55038 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Cxcl13O55038 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl13O55038 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl13O55038 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Gm14452-201ENSMUST00000118680 1632 ntBASIC12□□□□□ -0.49
Cxcl13O55038 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12□□□□□ -0.49
Cxcl13O55038 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12□□□□□ -0.49
Cxcl13O55038 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cxcl13O55038 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Gm12490-201ENSMUST00000120255 560 ntBASIC12□□□□□ -0.49
Cxcl13O55038 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cxcl13O55038 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12□□□□□ -0.49
Cxcl13O55038 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12□□□□□ -0.49
Cxcl13O55038 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Gm18018-201ENSMUST00000198273 408 ntBASIC12□□□□□ -0.49
Cxcl13O55038 Gm6745-201ENSMUST00000199216 526 ntBASIC12□□□□□ -0.49
Cxcl13O55038 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12□□□□□ -0.49
Cxcl13O55038 Gm7653-201ENSMUST00000214567 508 ntBASIC12□□□□□ -0.49
Cxcl13O55038 Gm18027-201ENSMUST00000218947 619 ntBASIC12□□□□□ -0.49
Cxcl13O55038 Gm19220-201ENSMUST00000222682 803 ntBASIC12□□□□□ -0.49
Cxcl13O55038 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cxcl13O55038 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Gm9768-201ENSMUST00000206007 2861 ntBASIC12□□□□□ -0.49
Cxcl13O55038 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl13O55038 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.99□□□□□ -0.49
Cxcl13O55038 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cxcl13O55038 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Cxcl13O55038 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.99□□□□□ -0.49
Cxcl13O55038 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.99□□□□□ -0.49
Cxcl13O55038 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.99□□□□□ -0.49
Cxcl13O55038 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.99□□□□□ -0.49
Cxcl13O55038 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Gm45668-201ENSMUST00000211271 493 ntBASIC11.99□□□□□ -0.49
Cxcl13O55038 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.99□□□□□ -0.49
Cxcl13O55038 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Gm6180-201ENSMUST00000065243 498 ntBASIC11.99□□□□□ -0.49
Cxcl13O55038 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cxcl13O55038 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cxcl13O55038 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl13O55038 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms