Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm26464-201ENSMUST00000157094 305 ntBASIC11.4□□□□□ -0.58
Chd6A3KFM7 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Mir3060-201ENSMUST00000175339 83 ntBASIC11.4□□□□□ -0.58
Chd6A3KFM7 Gm19459-201ENSMUST00000176240 835 ntBASIC11.4□□□□□ -0.58
Chd6A3KFM7 Gm38144-201ENSMUST00000192790 465 ntBASIC11.4□□□□□ -0.58
Chd6A3KFM7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chd6A3KFM7 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chd6A3KFM7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chd6A3KFM7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chd6A3KFM7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chd6A3KFM7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chd6A3KFM7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Chd6A3KFM7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chd6A3KFM7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.39□□□□□ -0.59
Chd6A3KFM7 Gm25951-201ENSMUST00000175330 64 ntBASIC11.39□□□□□ -0.59
Chd6A3KFM7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Gm6222-202ENSMUST00000182143 629 ntBASIC11.39□□□□□ -0.59
Chd6A3KFM7 AA914427-201ENSMUST00000193194 1166 ntBASIC11.39□□□□□ -0.59
Chd6A3KFM7 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Gm7902-201ENSMUST00000198842 947 ntBASIC11.39□□□□□ -0.59
Chd6A3KFM7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd6A3KFM7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Gm25545-201ENSMUST00000122673 323 ntBASIC11.38□□□□□ -0.59
Chd6A3KFM7 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Chd6A3KFM7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.38□□□□□ -0.59
Chd6A3KFM7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.38□□□□□ -0.59
Chd6A3KFM7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.38□□□□□ -0.59
Chd6A3KFM7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chd6A3KFM7 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Chd6A3KFM7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms