Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3854A0A1B0GSS6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm3854A0A1B0GSS6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3854A0A1B0GSS6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3854A0A1B0GSS6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3854A0A1B0GSS6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3854A0A1B0GSS6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3854A0A1B0GSS6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3854A0A1B0GSS6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3854A0A1B0GSS6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm3854A0A1B0GSS6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3854A0A1B0GSS6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3854A0A1B0GSS6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3854A0A1B0GSS6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Gm37714-201ENSMUST00000194742 342 ntBASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3854A0A1B0GSS6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm3854A0A1B0GSS6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms