Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Matn2-206ENSMUST00000228570 2798 ntBASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm5366-201ENSMUST00000215494 1338 ntBASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm7862-201ENSMUST00000121461 292 ntBASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm8597-201ENSMUST00000191525 1109 ntBASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms