Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crlf3Q9Z2L7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Gm5364-201ENSMUST00000216789 889 ntBASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 AV026068-213ENSMUST00000223675 1171 ntBASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crlf3Q9Z2L7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.4□□□□□ -0.1
Crlf3Q9Z2L7 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.39□□□□□ -0.11
Crlf3Q9Z2L7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms