Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
ClcnkaQ9WUB7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Gm6736-201ENSMUST00000166583 948 ntBASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ClcnkaQ9WUB7 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Gm38225-201ENSMUST00000194001 393 ntBASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClcnkaQ9WUB7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms