Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Chd1lQ9CXF7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Gm45167-201ENSMUST00000208007 322 ntBASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd1lQ9CXF7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms