Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf111Q99ML9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Gm15427-201ENSMUST00000117288 531 ntBASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.82□□□□□ -0.2
Rnf111Q99ML9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.81□□□□□ -0.2
Rnf111Q99ML9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Gm10175-201ENSMUST00000086013 645 ntBASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf111Q99ML9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms