Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SfpqQ8VIJ6 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.05■□□□□ 0
SfpqQ8VIJ6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SfpqQ8VIJ6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SfpqQ8VIJ6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SfpqQ8VIJ6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SfpqQ8VIJ6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SfpqQ8VIJ6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.05■□□□□ -0
SfpqQ8VIJ6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.05■□□□□ -0
SfpqQ8VIJ6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.05■□□□□ -0
SfpqQ8VIJ6 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.05■□□□□ -0
SfpqQ8VIJ6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
SfpqQ8VIJ6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Gm37230-201ENSMUST00000194491 818 ntBASIC15.04■□□□□ -0
SfpqQ8VIJ6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.04■□□□□ -0
SfpqQ8VIJ6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.03■□□□□ -0
SfpqQ8VIJ6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.03■□□□□ -0
SfpqQ8VIJ6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.03■□□□□ -0
SfpqQ8VIJ6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SfpqQ8VIJ6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms