Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Gm13616-201ENSMUST00000120600 222 ntBASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Gm10275-202ENSMUST00000168697 495 ntBASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Gm10275-201ENSMUST00000092620 635 ntBASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.53□□□□□ -0.08
Sfr1Q8BP27 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.53□□□□□ -0.08
Sfr1Q8BP27 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sfr1Q8BP27 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.52□□□□□ -0.08
Sfr1Q8BP27 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sfr1Q8BP27 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm6415-201ENSMUST00000118488 348 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm15920-201ENSMUST00000118998 402 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm13823-201ENSMUST00000119930 345 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm22175-201ENSMUST00000175007 78 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm29310-201ENSMUST00000185468 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21825-201ENSMUST00000185728 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm29109-201ENSMUST00000185895 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21896-201ENSMUST00000186520 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21873-201ENSMUST00000186728 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21794-201ENSMUST00000187056 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21880-201ENSMUST00000187275 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21826-201ENSMUST00000187451 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21198-201ENSMUST00000188393 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21749-201ENSMUST00000189343 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21901-201ENSMUST00000189568 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm29424-201ENSMUST00000189716 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm18766-201ENSMUST00000189811 808 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm28599-201ENSMUST00000189838 694 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21867-201ENSMUST00000189917 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm29269-201ENSMUST00000190087 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21722-201ENSMUST00000190153 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm28423-201ENSMUST00000190701 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21899-201ENSMUST00000190745 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21910-201ENSMUST00000191163 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm29541-201ENSMUST00000191351 678 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21849-201ENSMUST00000191571 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm28678-201ENSMUST00000191593 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm20910-201ENSMUST00000193268 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm21871-201ENSMUST00000194621 696 ntBASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sfr1Q8BP27 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sfr1Q8BP27 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms