Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Gm2810-201ENSMUST00000118681 990 ntBASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.4□□□□□ -0.26
Clrn3Q8BHH8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Clrn3Q8BHH8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.4□□□□□ -0.27
Clrn3Q8BHH8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Gm11594-201ENSMUST00000122313 162 ntBASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms