Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox17Q61473 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Sox17Q61473 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox17Q61473 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox17Q61473 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Sox17Q61473 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox17Q61473 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sox17Q61473 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.38□□□□□ -0.27
Sox17Q61473 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Gm25990-201ENSMUST00000102440 86 ntBASIC13.38□□□□□ -0.27
Sox17Q61473 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox17Q61473 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Gm4899-201ENSMUST00000178708 719 ntBASIC13.38□□□□□ -0.27
Sox17Q61473 Gm7787-201ENSMUST00000216858 688 ntBASIC13.38□□□□□ -0.27
Sox17Q61473 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Sox17Q61473 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Sox17Q61473 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.38□□□□□ -0.27
Sox17Q61473 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox17Q61473 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.37□□□□□ -0.27
Sox17Q61473 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sox17Q61473 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.37□□□□□ -0.27
Sox17Q61473 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
Sox17Q61473 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.37□□□□□ -0.27
Sox17Q61473 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.37□□□□□ -0.27
Sox17Q61473 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.37□□□□□ -0.27
Sox17Q61473 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.37□□□□□ -0.27
Sox17Q61473 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Sox17Q61473 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.37□□□□□ -0.27
Sox17Q61473 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox17Q61473 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Sox17Q61473 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sox17Q61473 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox17Q61473 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms