Protein–RNA interactions for Protein: P61961

Ufm1, Ubiquitin-fold modifier 1, mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufm1P61961 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.67□□□□□ -0.22
Ufm1P61961 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.67□□□□□ -0.22
Ufm1P61961 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ufm1P61961 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Ufm1P61961 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ufm1P61961 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.67□□□□□ -0.22
Ufm1P61961 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Ufm1P61961 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufm1P61961 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ufm1P61961 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.66□□□□□ -0.22
Ufm1P61961 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ufm1P61961 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.66□□□□□ -0.22
Ufm1P61961 Gm10275-202ENSMUST00000168697 495 ntBASIC13.66□□□□□ -0.22
Ufm1P61961 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.66□□□□□ -0.22
Ufm1P61961 Gm2651-201ENSMUST00000203560 838 ntBASIC13.66□□□□□ -0.22
Ufm1P61961 Gm10275-201ENSMUST00000092620 635 ntBASIC13.66□□□□□ -0.22
Ufm1P61961 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.66□□□□□ -0.22
Ufm1P61961 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ufm1P61961 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Ufm1P61961 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufm1P61961 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ufm1P61961 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.65□□□□□ -0.22
Ufm1P61961 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ufm1P61961 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ufm1P61961 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Ufm1P61961 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ufm1P61961 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ufm1P61961 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Ufm1P61961 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ufm1P61961 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.65□□□□□ -0.22
Ufm1P61961 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ufm1P61961 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.65□□□□□ -0.22
Ufm1P61961 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.65□□□□□ -0.22
Ufm1P61961 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ufm1P61961 Gm7461-201ENSMUST00000058918 827 ntBASIC13.65□□□□□ -0.22
Ufm1P61961 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ufm1P61961 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ufm1P61961 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ufm1P61961 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
Ufm1P61961 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ufm1P61961 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.65□□□□□ -0.22
Ufm1P61961 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.65□□□□□ -0.22
Ufm1P61961 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.65□□□□□ -0.22
Ufm1P61961 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ufm1P61961 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ufm1P61961 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ufm1P61961 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.64□□□□□ -0.23
Ufm1P61961 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ufm1P61961 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ufm1P61961 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.64□□□□□ -0.23
Ufm1P61961 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms