Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.54□□□□□ -0.56
Sssca1P56873 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.54□□□□□ -0.56
Sssca1P56873 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sssca1P56873 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.53□□□□□ -0.56
Sssca1P56873 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sssca1P56873 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sssca1P56873 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Sssca1P56873 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sssca1P56873 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.53□□□□□ -0.56
Sssca1P56873 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.53□□□□□ -0.56
Sssca1P56873 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sssca1P56873 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.53□□□□□ -0.56
Sssca1P56873 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
Sssca1P56873 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.53□□□□□ -0.56
Sssca1P56873 AV026068-213ENSMUST00000223675 1171 ntBASIC11.53□□□□□ -0.56
Sssca1P56873 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sssca1P56873 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sssca1P56873 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sssca1P56873 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sssca1P56873 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sssca1P56873 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sssca1P56873 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sssca1P56873 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sssca1P56873 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sssca1P56873 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.52□□□□□ -0.56
Sssca1P56873 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sssca1P56873 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.52□□□□□ -0.56
Sssca1P56873 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sssca1P56873 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sssca1P56873 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sssca1P56873 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.52□□□□□ -0.57
Sssca1P56873 Gm7153-201ENSMUST00000117092 455 ntBASIC11.52□□□□□ -0.57
Sssca1P56873 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.52□□□□□ -0.57
Sssca1P56873 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.52□□□□□ -0.57
Sssca1P56873 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.52□□□□□ -0.57
Sssca1P56873 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.52□□□□□ -0.57
Sssca1P56873 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.52□□□□□ -0.57
Sssca1P56873 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.52□□□□□ -0.57
Sssca1P56873 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.52□□□□□ -0.57
Sssca1P56873 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Sssca1P56873 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sssca1P56873 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sssca1P56873 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.51□□□□□ -0.57
Sssca1P56873 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sssca1P56873 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms