Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6aP27664 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6aP27664 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pde6aP27664 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6aP27664 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.52■□□□□ 0.24
Pde6aP27664 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6aP27664 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6aP27664 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6aP27664 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.52■□□□□ 0.24
Pde6aP27664 Gm27321-201ENSMUST00000185021 205 ntBASIC16.52■□□□□ 0.24
Pde6aP27664 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.52■□□□□ 0.24
Pde6aP27664 Gm43703-201ENSMUST00000200523 763 ntBASIC16.52■□□□□ 0.24
Pde6aP27664 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.52■□□□□ 0.24
Pde6aP27664 Gm9063-201ENSMUST00000223299 582 ntBASIC16.52■□□□□ 0.24
Pde6aP27664 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6aP27664 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pde6aP27664 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6aP27664 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.52■□□□□ 0.24
Pde6aP27664 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Pde6aP27664 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pde6aP27664 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pde6aP27664 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pde6aP27664 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.52■□□□□ 0.23
Pde6aP27664 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Pde6aP27664 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pde6aP27664 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pde6aP27664 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pde6aP27664 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pde6aP27664 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pde6aP27664 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pde6aP27664 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pde6aP27664 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.51■□□□□ 0.23
Pde6aP27664 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6aP27664 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6aP27664 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pde6aP27664 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.51■□□□□ 0.23
Pde6aP27664 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6aP27664 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6aP27664 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6aP27664 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pde6aP27664 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pde6aP27664 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.51■□□□□ 0.23
Pde6aP27664 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6aP27664 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6aP27664 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.51■□□□□ 0.23
Pde6aP27664 Gm8584-201ENSMUST00000171982 758 ntBASIC16.51■□□□□ 0.23
Pde6aP27664 Gm27306-201ENSMUST00000183970 107 ntBASIC16.51■□□□□ 0.23
Pde6aP27664 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.51■□□□□ 0.23
Pde6aP27664 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.51■□□□□ 0.23
Pde6aP27664 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.51■□□□□ 0.23
Pde6aP27664 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6aP27664 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6aP27664 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pde6aP27664 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pde6aP27664 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.51■□□□□ 0.23
Pde6aP27664 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pde6aP27664 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.5■□□□□ 0.23
Pde6aP27664 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.5■□□□□ 0.23
Pde6aP27664 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pde6aP27664 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Pde6aP27664 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.5■□□□□ 0.23
Pde6aP27664 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Pde6aP27664 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pde6aP27664 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.5■□□□□ 0.23
Pde6aP27664 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6aP27664 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6aP27664 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6aP27664 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6aP27664 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6aP27664 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6aP27664 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6aP27664 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6aP27664 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6aP27664 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pde6aP27664 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6aP27664 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.49■□□□□ 0.23
Pde6aP27664 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6aP27664 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.49■□□□□ 0.23
Pde6aP27664 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pde6aP27664 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.49■□□□□ 0.23
Pde6aP27664 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms