Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cd40P27512 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.9□□□□□ -0.34
Cd40P27512 Gm15653-201ENSMUST00000119247 907 ntBASIC12.9□□□□□ -0.34
Cd40P27512 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40P27512 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40P27512 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.9□□□□□ -0.34
Cd40P27512 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40P27512 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cd40P27512 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.9□□□□□ -0.34
Cd40P27512 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40P27512 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40P27512 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40P27512 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cd40P27512 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40P27512 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.9□□□□□ -0.34
Cd40P27512 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40P27512 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cd40P27512 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cd40P27512 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cd40P27512 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40P27512 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40P27512 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd40P27512 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Cd40P27512 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cd40P27512 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Cd40P27512 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cd40P27512 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Cd40P27512 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Cd40P27512 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.89□□□□□ -0.35
Cd40P27512 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cd40P27512 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cd40P27512 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cd40P27512 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cd40P27512 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cd40P27512 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cd40P27512 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.89□□□□□ -0.35
Cd40P27512 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.89□□□□□ -0.35
Cd40P27512 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Cd40P27512 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.89□□□□□ -0.35
Cd40P27512 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.89□□□□□ -0.35
Cd40P27512 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40P27512 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Cd40P27512 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cd40P27512 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.88□□□□□ -0.35
Cd40P27512 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Gm27533-201ENSMUST00000183800 152 ntBASIC12.88□□□□□ -0.35
Cd40P27512 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.88□□□□□ -0.35
Cd40P27512 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.88□□□□□ -0.35
Cd40P27512 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.88□□□□□ -0.35
Cd40P27512 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.88□□□□□ -0.35
Cd40P27512 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40P27512 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms