Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.36□□□□□ -0.27
Nid1P10493 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nid1P10493 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.36□□□□□ -0.27
Nid1P10493 Gm15957-201ENSMUST00000118893 974 ntBASIC13.36□□□□□ -0.27
Nid1P10493 Gm11745-201ENSMUST00000121669 448 ntBASIC13.36□□□□□ -0.27
Nid1P10493 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Gm25911-201ENSMUST00000157621 56 ntBASIC13.36□□□□□ -0.27
Nid1P10493 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.36□□□□□ -0.27
Nid1P10493 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.36□□□□□ -0.27
Nid1P10493 Gm5264-201ENSMUST00000190584 848 ntBASIC13.36□□□□□ -0.27
Nid1P10493 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.36□□□□□ -0.27
Nid1P10493 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Nid1P10493 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.36□□□□□ -0.27
Nid1P10493 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.36□□□□□ -0.27
Nid1P10493 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nid1P10493 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.36□□□□□ -0.27
Nid1P10493 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nid1P10493 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nid1P10493 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Nid1P10493 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nid1P10493 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Nid1P10493 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nid1P10493 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.35□□□□□ -0.27
Nid1P10493 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.35□□□□□ -0.27
Nid1P10493 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.35□□□□□ -0.27
Nid1P10493 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.35□□□□□ -0.27
Nid1P10493 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Gm44771-201ENSMUST00000206975 626 ntBASIC13.35□□□□□ -0.27
Nid1P10493 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nid1P10493 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.35□□□□□ -0.27
Nid1P10493 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nid1P10493 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.35□□□□□ -0.27
Nid1P10493 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nid1P10493 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Nid1P10493 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.34□□□□□ -0.27
Nid1P10493 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nid1P10493 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.34□□□□□ -0.27
Nid1P10493 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Nid1P10493 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.34□□□□□ -0.27
Nid1P10493 Gm27494-201ENSMUST00000184735 189 ntBASIC13.34□□□□□ -0.27
Nid1P10493 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.34□□□□□ -0.27
Nid1P10493 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.34□□□□□ -0.27
Nid1P10493 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.34□□□□□ -0.27
Nid1P10493 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Nid1P10493 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Nid1P10493 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nid1P10493 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nid1P10493 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nid1P10493 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nid1P10493 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nid1P10493 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nid1P10493 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms