Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv29A0A0G2LB96 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv29A0A0G2LB96 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv29A0A0G2LB96 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv29A0A0G2LB96 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv29A0A0G2LB96 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Gm10275-202ENSMUST00000168697 495 ntBASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Gm10275-201ENSMUST00000092620 635 ntBASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Matn2-206ENSMUST00000228570 2798 ntBASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv29A0A0G2LB96 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Mir5126-201ENSMUST00000175513 77 ntBASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Gm5177-201ENSMUST00000183092 997 ntBASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv29A0A0G2LB96 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms