Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Gm25406-201ENSMUST00000157599 105 ntBASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav8-1A0A075B641 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Gm9013-201ENSMUST00000132939 882 ntBASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 AC130713.1-201ENSMUST00000228853 1096 ntBASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav8-1A0A075B641 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms