Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
H2afb2S4R1M3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
H2afb2S4R1M3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.9■■□□□ 1.1
H2afb2S4R1M3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
H2afb2S4R1M3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
H2afb2S4R1M3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
H2afb2S4R1M3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
H2afb2S4R1M3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
H2afb2S4R1M3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
H2afb2S4R1M3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
H2afb2S4R1M3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
H2afb2S4R1M3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
H2afb2S4R1M3 Gm11175-201ENSMUST00000116172 543 ntBASIC21.89■■□□□ 1.09
H2afb2S4R1M3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
H2afb2S4R1M3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
H2afb2S4R1M3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
H2afb2S4R1M3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.88■■□□□ 1.09
H2afb2S4R1M3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2afb2S4R1M3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2afb2S4R1M3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2afb2S4R1M3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
H2afb2S4R1M3 Gm22567-201ENSMUST00000175542 342 ntBASIC21.88■■□□□ 1.09
H2afb2S4R1M3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
H2afb2S4R1M3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
H2afb2S4R1M3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
H2afb2S4R1M3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
H2afb2S4R1M3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2afb2S4R1M3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H2afb2S4R1M3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.87■■□□□ 1.09
H2afb2S4R1M3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H2afb2S4R1M3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H2afb2S4R1M3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H2afb2S4R1M3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H2afb2S4R1M3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
H2afb2S4R1M3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
H2afb2S4R1M3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
H2afb2S4R1M3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
H2afb2S4R1M3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
H2afb2S4R1M3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
H2afb2S4R1M3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
H2afb2S4R1M3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
H2afb2S4R1M3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
H2afb2S4R1M3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
H2afb2S4R1M3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
H2afb2S4R1M3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
H2afb2S4R1M3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
H2afb2S4R1M3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
H2afb2S4R1M3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.85■■□□□ 1.09
H2afb2S4R1M3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
H2afb2S4R1M3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
H2afb2S4R1M3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
H2afb2S4R1M3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
H2afb2S4R1M3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
H2afb2S4R1M3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
H2afb2S4R1M3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
H2afb2S4R1M3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
H2afb2S4R1M3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
H2afb2S4R1M3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
H2afb2S4R1M3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
H2afb2S4R1M3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.82■■□□□ 1.08
H2afb2S4R1M3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
H2afb2S4R1M3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
H2afb2S4R1M3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
H2afb2S4R1M3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
H2afb2S4R1M3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
H2afb2S4R1M3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
H2afb2S4R1M3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
H2afb2S4R1M3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
H2afb2S4R1M3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
H2afb2S4R1M3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
H2afb2S4R1M3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
H2afb2S4R1M3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.81■■□□□ 1.08
H2afb2S4R1M3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
H2afb2S4R1M3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
H2afb2S4R1M3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
H2afb2S4R1M3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
H2afb2S4R1M3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
H2afb2S4R1M3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
H2afb2S4R1M3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
H2afb2S4R1M3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H2afb2S4R1M3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
H2afb2S4R1M3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.79■■□□□ 1.08
H2afb2S4R1M3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.79■■□□□ 1.08
H2afb2S4R1M3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H2afb2S4R1M3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H2afb2S4R1M3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
H2afb2S4R1M3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H2afb2S4R1M3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H2afb2S4R1M3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
H2afb2S4R1M3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.79■■□□□ 1.08
H2afb2S4R1M3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afb2S4R1M3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
H2afb2S4R1M3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afb2S4R1M3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afb2S4R1M3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afb2S4R1M3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
H2afb2S4R1M3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afb2S4R1M3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
H2afb2S4R1M3 Gm27502-201ENSMUST00000183495 199 ntBASIC21.77■■□□□ 1.08
H2afb2S4R1M3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms