Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.93■■□□□ 1.26
Smarcb1Q9Z0H3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Smarcb1Q9Z0H3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Smarcb1Q9Z0H3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Smarcb1Q9Z0H3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Smarcb1Q9Z0H3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Smarcb1Q9Z0H3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Smarcb1Q9Z0H3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Smarcb1Q9Z0H3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Smarcb1Q9Z0H3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Smarcb1Q9Z0H3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Smarcb1Q9Z0H3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Smarcb1Q9Z0H3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Smarcb1Q9Z0H3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smarcb1Q9Z0H3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smarcb1Q9Z0H3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.91■■□□□ 1.26
Smarcb1Q9Z0H3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smarcb1Q9Z0H3 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.91■■□□□ 1.26
Smarcb1Q9Z0H3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Smarcb1Q9Z0H3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Smarcb1Q9Z0H3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Smarcb1Q9Z0H3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.9■■□□□ 1.26
Smarcb1Q9Z0H3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Smarcb1Q9Z0H3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Smarcb1Q9Z0H3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
Smarcb1Q9Z0H3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Smarcb1Q9Z0H3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Smarcb1Q9Z0H3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Smarcb1Q9Z0H3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Smarcb1Q9Z0H3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Smarcb1Q9Z0H3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Smarcb1Q9Z0H3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Smarcb1Q9Z0H3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Smarcb1Q9Z0H3 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.88■■□□□ 1.25
Smarcb1Q9Z0H3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Smarcb1Q9Z0H3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Smarcb1Q9Z0H3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.88■■□□□ 1.25
Smarcb1Q9Z0H3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Smarcb1Q9Z0H3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Smarcb1Q9Z0H3 Gm15820-201ENSMUST00000201566 728 ntBASIC22.87■■□□□ 1.25
Smarcb1Q9Z0H3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Smarcb1Q9Z0H3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smarcb1Q9Z0H3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smarcb1Q9Z0H3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Smarcb1Q9Z0H3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Smarcb1Q9Z0H3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Smarcb1Q9Z0H3 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.86■■□□□ 1.25
Smarcb1Q9Z0H3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.86■■□□□ 1.25
Smarcb1Q9Z0H3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Smarcb1Q9Z0H3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smarcb1Q9Z0H3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Smarcb1Q9Z0H3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.85■■□□□ 1.25
Smarcb1Q9Z0H3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smarcb1Q9Z0H3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smarcb1Q9Z0H3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smarcb1Q9Z0H3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smarcb1Q9Z0H3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Smarcb1Q9Z0H3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Smarcb1Q9Z0H3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.84■■□□□ 1.25
Smarcb1Q9Z0H3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Smarcb1Q9Z0H3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Smarcb1Q9Z0H3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Smarcb1Q9Z0H3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smarcb1Q9Z0H3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.82■■□□□ 1.24
Smarcb1Q9Z0H3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smarcb1Q9Z0H3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.82■■□□□ 1.24
Smarcb1Q9Z0H3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smarcb1Q9Z0H3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smarcb1Q9Z0H3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.81■■□□□ 1.24
Smarcb1Q9Z0H3 Gm10232-201ENSMUST00000089221 720 ntBASIC22.81■■□□□ 1.24
Smarcb1Q9Z0H3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.81■■□□□ 1.24
Smarcb1Q9Z0H3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Smarcb1Q9Z0H3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smarcb1Q9Z0H3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smarcb1Q9Z0H3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smarcb1Q9Z0H3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Smarcb1Q9Z0H3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smarcb1Q9Z0H3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Smarcb1Q9Z0H3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.8■■□□□ 1.24
Smarcb1Q9Z0H3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smarcb1Q9Z0H3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smarcb1Q9Z0H3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smarcb1Q9Z0H3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.8■■□□□ 1.24
Smarcb1Q9Z0H3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.79■■□□□ 1.24
Smarcb1Q9Z0H3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Smarcb1Q9Z0H3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Smarcb1Q9Z0H3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Smarcb1Q9Z0H3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Smarcb1Q9Z0H3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smarcb1Q9Z0H3 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.78■■□□□ 1.24
Smarcb1Q9Z0H3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smarcb1Q9Z0H3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smarcb1Q9Z0H3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Smarcb1Q9Z0H3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smarcb1Q9Z0H3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Smarcb1Q9Z0H3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smarcb1Q9Z0H3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
Smarcb1Q9Z0H3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Smarcb1Q9Z0H3 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.76■■□□□ 1.23
Smarcb1Q9Z0H3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms