Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.37■□□□□ 0.53
Rcl1Q9JJT0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rcl1Q9JJT0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rcl1Q9JJT0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rcl1Q9JJT0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rcl1Q9JJT0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rcl1Q9JJT0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.35■□□□□ 0.53
Rcl1Q9JJT0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rcl1Q9JJT0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rcl1Q9JJT0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rcl1Q9JJT0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rcl1Q9JJT0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Rcl1Q9JJT0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rcl1Q9JJT0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.34■□□□□ 0.53
Rcl1Q9JJT0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rcl1Q9JJT0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rcl1Q9JJT0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rcl1Q9JJT0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.53
Rcl1Q9JJT0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Rcl1Q9JJT0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rcl1Q9JJT0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.33■□□□□ 0.52
Rcl1Q9JJT0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rcl1Q9JJT0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.33■□□□□ 0.52
Rcl1Q9JJT0 Gm6311-201ENSMUST00000073790 878 ntBASIC18.33■□□□□ 0.52
Rcl1Q9JJT0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.32■□□□□ 0.52
Rcl1Q9JJT0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.32■□□□□ 0.52
Rcl1Q9JJT0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rcl1Q9JJT0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rcl1Q9JJT0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rcl1Q9JJT0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rcl1Q9JJT0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rcl1Q9JJT0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rcl1Q9JJT0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rcl1Q9JJT0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rcl1Q9JJT0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rcl1Q9JJT0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rcl1Q9JJT0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rcl1Q9JJT0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rcl1Q9JJT0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rcl1Q9JJT0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rcl1Q9JJT0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rcl1Q9JJT0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rcl1Q9JJT0 Gm4799-201ENSMUST00000095396 657 ntBASIC18.3■□□□□ 0.52
Rcl1Q9JJT0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rcl1Q9JJT0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rcl1Q9JJT0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rcl1Q9JJT0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rcl1Q9JJT0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rcl1Q9JJT0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.29■□□□□ 0.52
Rcl1Q9JJT0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rcl1Q9JJT0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rcl1Q9JJT0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rcl1Q9JJT0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rcl1Q9JJT0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.28■□□□□ 0.52
Rcl1Q9JJT0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rcl1Q9JJT0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.28■□□□□ 0.52
Rcl1Q9JJT0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rcl1Q9JJT0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Rcl1Q9JJT0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.28■□□□□ 0.52
Rcl1Q9JJT0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rcl1Q9JJT0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rcl1Q9JJT0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rcl1Q9JJT0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.27■□□□□ 0.52
Rcl1Q9JJT0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rcl1Q9JJT0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rcl1Q9JJT0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.27■□□□□ 0.52
Rcl1Q9JJT0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rcl1Q9JJT0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rcl1Q9JJT0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rcl1Q9JJT0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rcl1Q9JJT0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rcl1Q9JJT0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.25■□□□□ 0.51
Rcl1Q9JJT0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.25■□□□□ 0.51
Rcl1Q9JJT0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.25■□□□□ 0.51
Rcl1Q9JJT0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.25■□□□□ 0.51
Rcl1Q9JJT0 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.25■□□□□ 0.51
Rcl1Q9JJT0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rcl1Q9JJT0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rcl1Q9JJT0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rcl1Q9JJT0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rcl1Q9JJT0 Mir3960-201ENSMUST00000198213 73 ntBASIC18.24■□□□□ 0.51
Rcl1Q9JJT0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rcl1Q9JJT0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rcl1Q9JJT0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rcl1Q9JJT0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rcl1Q9JJT0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rcl1Q9JJT0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rcl1Q9JJT0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rcl1Q9JJT0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rcl1Q9JJT0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rcl1Q9JJT0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rcl1Q9JJT0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rcl1Q9JJT0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rcl1Q9JJT0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rcl1Q9JJT0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.22■□□□□ 0.51
Rcl1Q9JJT0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rcl1Q9JJT0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rcl1Q9JJT0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rcl1Q9JJT0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rcl1Q9JJT0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms